Unipro UGENE for Linux 1.32.0

Unipro in Education / Science

Unipro UGENE for Linux screenshot

User Rating: 3.3 (30 votes)

Unipro UGENE for Linux is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences.

Features:

Integrated tools
Multiple sequence alignment using MUSCLE 3, KAlign, Clustal;
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
PCR Primers design using Primer 3;
Cloning in silico capabilities;
Queries to NCBI BLAST and CDD databases;
Protein secondary structure prediction using GOR IV and PSIPRED;
Phylogenetic analysis with Phylip;
Search for restriction enzymes and integration with REBASE;
Extremely fast repeat finder;
DNA short reads to reference alignment using Bowtie;
De novo assembly with CAP3;
Search for transcription factor binding sites using SITECON;
Protein back translation;
ORF finder;
Complete Smith-Waterman algorithm implementation;
Support for external tools: BLAST+, MAFFT, T-Coffee;
Assembly Browser — a shiny BAM viewer.

User interface
Visual and interactive genome browsing including circular plasmid view;
Multiple alignment editor;
Chromatograms visualization;
3D viewer for files in PDB and MMDB formats with anaglyph stereo mode support;
Phylogenetic tree viewer;
Dot plot visualization;
Query designer enables search for complex annotation patterns;
Easy to use workflow designer for custom computational workflows.

High performance computing in UGENE
Complete support of modern multicore processors and SSE instructions;
Out of the box support of modern GPUs using NVIDIA CUDA and ATI Stream;
Support for cloud computing: running computational tasks on Amazon EC2 cloud;
Support for supercomputers and distributed computing.

Cooperation
Can be used for education purposes in schools and universities;
Features to be included into the next release are initiated by users;
UGENE team is ready for collaboration in related projects, both free or commercial

File Size: 68.7001953125 MB License: Freeware Price: FREE
Platform: Linux
Downloads: Total: 206 | This Month: 7 Released: 2019-02-27
Unipro UGENE for Linux Similar Software

Unipro UGENE for Mac 1.32.0 Unipro     update

Unipro UGENE for Mac is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. ... IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction enzymes and integration with REBASE; Extremely fast ... using Bowtie; De novo assembly with CAP3; Search for transcription factor binding sites using SITECON; Protein back .... Free download of Unipro UGENE for Mac 1.32.0

Unipro UGENE 64-bit 1.32.0 Unipro     update

Unipro UGENE 64-bit is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. ... IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction enzymes and integration with REBASE; Extremely fast ... using Bowtie; De novo assembly with CAP3; Search for transcription factor binding sites using SITECON; Protein back .... Free download of Unipro UGENE 64-bit 1.32.0

Unipro UGENE 1.32.0 Unipro     update

Unipro UGENE is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. Unipro UGENE is a powerful piece of software that provides you with advanced tools for creating, editing and annotating nucleic acid and protein ... any kind of shortages. It comes with support for multiple biological data formats and it provides visualization .... Free download of Unipro UGENE 1.32.0

Stellarium for Linux 0.19.1.1 Stellarium     update

Stellarium for Linux is a free open source planetarium for your computer. It shows a realistic sky in ... objects asterisms and illustrations of the constellations constellations for 20+ different cultures images of nebulae (full Messier ... powerful zoom time control multilingual interface fisheye projection for planetarium domes spheric mirror projection for your own .... Free download of Stellarium for Linux 0.19.1.1

software pick   

MayaVi for Linux 1.5 Prabhu Ramachandran    

... Python and uses the amazing Visualization Toolkit (VTK) for the graphics. It provides a GUI written using ... via texture and ray cast mappers. * Support for any VTK dataset using the VTK data format. Works for rectilinear, structured, unstructured grid data and also for polygonal data. Both the original VTK data formats .... Free download of MayaVi for Linux 1.5

software pick   
Popular Software in Education / Science

Unipro UGENE for Mac 1.32.0 Unipro     update

Perform DNA and protein sequence analysis on your PC. Free download of Unipro UGENE for Mac 1.32.0

Stellarium for Mac OS X 0.19.1.1 Stellarium     update

Stellarium is a free open source planetarium for your computer. Free download of Stellarium for Mac OS X 0.19.1.1

software pick   

AstroGrav for Mac 4.0 AstroGrav Astronomy Software     update

A high precision solar system simulator/calculator with interactive 3D viewing.. Free download of AstroGrav for Mac 4.0

MDM 1.0 AgriMetSoft     new

We developed the “MDM” (Meteorological Drought Monitoring) sof .... Free download of MDM 1.0

AstroViewer 3.1.6 Dirk Matussek    

AstroViewer planetarium software for quick orientation in the night sky. Free download of AstroViewer 3.1.6